Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.85■□□□□ 0.61
GGPS1O95749 AC016027.1-202ENST00000607927 1699 ntBASIC18.85■□□□□ 0.61
GGPS1O95749 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.85■□□□□ 0.61
GGPS1O95749 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GGPS1O95749 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.84■□□□□ 0.61
GGPS1O95749 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
GGPS1O95749 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.84■□□□□ 0.61
GGPS1O95749 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.84■□□□□ 0.61
GGPS1O95749 AC124947.2-201ENST00000547118 1133 ntBASIC18.84■□□□□ 0.61
GGPS1O95749 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GGPS1O95749 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GGPS1O95749 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.84■□□□□ 0.61
GGPS1O95749 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GGPS1O95749 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GGPS1O95749 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.83■□□□□ 0.61
GGPS1O95749 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.83■□□□□ 0.61
GGPS1O95749 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.83■□□□□ 0.61
GGPS1O95749 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
GGPS1O95749 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
GGPS1O95749 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.83■□□□□ 0.6
GGPS1O95749 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.83■□□□□ 0.6
GGPS1O95749 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.83■□□□□ 0.6
GGPS1O95749 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
GGPS1O95749 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
GGPS1O95749 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GGPS1O95749 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GGPS1O95749 AC015911.4-201ENST00000588022 1070 ntBASIC18.83■□□□□ 0.6
GGPS1O95749 AC011467.4-201ENST00000594891 528 ntBASIC18.83■□□□□ 0.6
GGPS1O95749 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.83■□□□□ 0.6
GGPS1O95749 AP001059.3-201ENST00000619053 235 ntBASIC18.83■□□□□ 0.6
GGPS1O95749 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.83■□□□□ 0.6
GGPS1O95749 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.83■□□□□ 0.6
GGPS1O95749 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.83■□□□□ 0.6
GGPS1O95749 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GGPS1O95749 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GGPS1O95749 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GGPS1O95749 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
GGPS1O95749 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms