Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 AC078925.2-201ENST00000624013 1973 ntBASIC15.17■□□□□ 0.02
UBL3O95164 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.17■□□□□ 0.02
UBL3O95164 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.17■□□□□ 0.02
UBL3O95164 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.17■□□□□ 0.02
UBL3O95164 AC073648.2-201ENST00000510116 352 ntBASIC15.17■□□□□ 0.02
UBL3O95164 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.17■□□□□ 0.02
UBL3O95164 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.17■□□□□ 0.02
UBL3O95164 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.17■□□□□ 0.02
UBL3O95164 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
UBL3O95164 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.17■□□□□ 0.02
UBL3O95164 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UBL3O95164 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBL3O95164 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.16■□□□□ 0.02
UBL3O95164 AL135999.2-201ENST00000622438 1686 ntBASIC15.16■□□□□ 0.02
UBL3O95164 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.16■□□□□ 0.02
UBL3O95164 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.16■□□□□ 0.02
UBL3O95164 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.16■□□□□ 0.02
UBL3O95164 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 SART3-203ENST00000546611 1184 ntBASIC15.16■□□□□ 0.02
UBL3O95164 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.16■□□□□ 0.02
UBL3O95164 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UBL3O95164 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UBL3O95164 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 RNF216P1-203ENST00000404404 2427 ntBASIC15.16■□□□□ 0.02
UBL3O95164 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
UBL3O95164 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBL3O95164 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
UBL3O95164 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 ACTG1P4-201ENST00000425123 1122 ntBASIC15.15■□□□□ 0.02
UBL3O95164 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.15■□□□□ 0.02
UBL3O95164 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 AC064862.7-201ENST00000604520 867 ntBASIC15.15■□□□□ 0.02
UBL3O95164 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.15■□□□□ 0.02
UBL3O95164 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
UBL3O95164 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 NCF1C-201ENST00000438382 1427 ntBASIC15.15■□□□□ 0.02
UBL3O95164 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
UBL3O95164 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBL3O95164 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms