Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.16■□□□□ 0.02
CEACAM4O75871 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.16■□□□□ 0.02
CEACAM4O75871 AL359881.2-201ENST00000602973 570 ntBASIC15.16■□□□□ 0.02
CEACAM4O75871 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.16■□□□□ 0.02
CEACAM4O75871 AC004840.1-201ENST00000636359 365 ntBASIC15.16■□□□□ 0.02
CEACAM4O75871 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CEACAM4O75871 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CEACAM4O75871 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CEACAM4O75871 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CEACAM4O75871 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CEACAM4O75871 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CEACAM4O75871 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CEACAM4O75871 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.15■□□□□ 0.02
CEACAM4O75871 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.15■□□□□ 0.02
CEACAM4O75871 AL132655.2-201ENST00000596276 594 ntBASIC15.15■□□□□ 0.02
CEACAM4O75871 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CEACAM4O75871 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CEACAM4O75871 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 KRT8P39-201ENST00000396270 1433 ntBASIC15.15■□□□□ 0.02
CEACAM4O75871 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.15■□□□□ 0.02
CEACAM4O75871 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.15■□□□□ 0.02
CEACAM4O75871 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.15■□□□□ 0.02
CEACAM4O75871 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CEACAM4O75871 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
CEACAM4O75871 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CEACAM4O75871 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.14■□□□□ 0.01
CEACAM4O75871 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CEACAM4O75871 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 RNA5SP410-201ENST00000516285 106 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 AC140912.1-201ENST00000577171 1054 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.14■□□□□ 0.01
CEACAM4O75871 AL008721.1-201ENST00000609964 604 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CEACAM4O75871 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.14■□□□□ 0.01
CEACAM4O75871 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.14■□□□□ 0.01
CEACAM4O75871 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.14■□□□□ 0.01
CEACAM4O75871 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.14■□□□□ 0.01
CEACAM4O75871 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.14■□□□□ 0.01
CEACAM4O75871 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CEACAM4O75871 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CEACAM4O75871 SNX33P1-201ENST00000592116 1762 ntBASIC15.13■□□□□ 0.01
CEACAM4O75871 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CEACAM4O75871 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CEACAM4O75871 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CEACAM4O75871 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms