Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 CYP2A7P1-201ENST00000595391 815 ntBASIC16.19■□□□□ 0.18
PRAMEF4O60810 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF4O60810 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF4O60810 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF4O60810 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF4O60810 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF4O60810 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF4O60810 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF4O60810 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 AL353732.1-201ENST00000569618 1459 ntBASIC16.18■□□□□ 0.18
PRAMEF4O60810 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 IGLL3P-201ENST00000412472 434 ntBASIC16.18■□□□□ 0.18
PRAMEF4O60810 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 AC108751.1-201ENST00000490852 363 ntBASIC16.18■□□□□ 0.18
PRAMEF4O60810 RNA5SP415-201ENST00000517246 115 ntBASIC16.18■□□□□ 0.18
PRAMEF4O60810 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF4O60810 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF4O60810 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 GGT4P-201ENST00000623672 1708 ntBASIC16.17■□□□□ 0.18
PRAMEF4O60810 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 FAM185BP-201ENST00000443595 716 ntBASIC16.17■□□□□ 0.18
PRAMEF4O60810 FDX1P1-201ENST00000449115 551 ntBASIC16.17■□□□□ 0.18
PRAMEF4O60810 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 KRT8P39-201ENST00000396270 1433 ntBASIC16.17■□□□□ 0.18
PRAMEF4O60810 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 OR6D1P-202ENST00000641007 5290 ntBASIC16.17■□□□□ 0.18
PRAMEF4O60810 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms