Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TSPAN3O60637 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 CNN2P11-201ENST00000429351 262 ntBASIC17.34■□□□□ 0.37
TSPAN3O60637 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.34■□□□□ 0.37
TSPAN3O60637 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 AC087641.1-201ENST00000557561 1021 ntBASIC17.34■□□□□ 0.37
TSPAN3O60637 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TSPAN3O60637 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
TSPAN3O60637 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TSPAN3O60637 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TSPAN3O60637 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TSPAN3O60637 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TSPAN3O60637 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TSPAN3O60637 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TSPAN3O60637 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TSPAN3O60637 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 AC254562.1-201ENST00000417586 456 ntBASIC17.33■□□□□ 0.36
TSPAN3O60637 HCG4-201ENST00000418983 998 ntBASIC17.33■□□□□ 0.36
TSPAN3O60637 AL671277.1-201ENST00000429656 993 ntBASIC17.33■□□□□ 0.36
TSPAN3O60637 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
TSPAN3O60637 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.33■□□□□ 0.36
TSPAN3O60637 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TSPAN3O60637 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.33■□□□□ 0.36
TSPAN3O60637 AC099522.2-201ENST00000607001 744 ntBASIC17.33■□□□□ 0.36
TSPAN3O60637 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TSPAN3O60637 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.33■□□□□ 0.36
TSPAN3O60637 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.33■□□□□ 0.36
TSPAN3O60637 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.33■□□□□ 0.36
TSPAN3O60637 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSPAN3O60637 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.32■□□□□ 0.36
TSPAN3O60637 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TSPAN3O60637 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TSPAN3O60637 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TSPAN3O60637 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.32■□□□□ 0.36
TSPAN3O60637 TIMM8BP1-201ENST00000452384 211 ntBASIC17.32■□□□□ 0.36
TSPAN3O60637 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.32■□□□□ 0.36
TSPAN3O60637 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.32■□□□□ 0.36
TSPAN3O60637 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 CYP2A7P1-201ENST00000595391 815 ntBASIC17.32■□□□□ 0.36
TSPAN3O60637 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.32■□□□□ 0.36
TSPAN3O60637 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.32■□□□□ 0.36
TSPAN3O60637 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.32■□□□□ 0.36
TSPAN3O60637 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms