Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KDELR3O43731 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 AC006538.1-201ENST00000567905 1585 ntBASIC17.03■□□□□ 0.32
KDELR3O43731 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.03■□□□□ 0.32
KDELR3O43731 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.03■□□□□ 0.32
KDELR3O43731 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
KDELR3O43731 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 ACTG1P14-201ENST00000446382 1122 ntBASIC17.03■□□□□ 0.32
KDELR3O43731 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 HLA-J-202ENST00000469281 1241 ntBASIC17.03■□□□□ 0.32
KDELR3O43731 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.03■□□□□ 0.32
KDELR3O43731 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.03■□□□□ 0.32
KDELR3O43731 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KDELR3O43731 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
KDELR3O43731 AC021097.1-201ENST00000607902 574 ntBASIC17.03■□□□□ 0.32
KDELR3O43731 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
KDELR3O43731 LTB4R2-202ENST00000528054 3092 ntBASIC17.03■□□□□ 0.32
KDELR3O43731 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
KDELR3O43731 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KDELR3O43731 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.03■□□□□ 0.32
KDELR3O43731 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
KDELR3O43731 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDELR3O43731 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
KDELR3O43731 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.02■□□□□ 0.32
KDELR3O43731 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 AL512652.2-201ENST00000625156 1716 ntBASIC17.02■□□□□ 0.32
KDELR3O43731 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
KDELR3O43731 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.02■□□□□ 0.32
KDELR3O43731 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
KDELR3O43731 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.02■□□□□ 0.32
KDELR3O43731 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.02■□□□□ 0.32
KDELR3O43731 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.02■□□□□ 0.32
KDELR3O43731 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.02■□□□□ 0.32
KDELR3O43731 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 YBX1P5-201ENST00000509441 847 ntBASIC17.02■□□□□ 0.32
KDELR3O43731 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.02■□□□□ 0.32
KDELR3O43731 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.02■□□□□ 0.32
KDELR3O43731 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 AC099522.2-201ENST00000607001 744 ntBASIC17.02■□□□□ 0.32
KDELR3O43731 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 AL161645.1-201ENST00000622716 1255 ntBASIC17.02■□□□□ 0.32
KDELR3O43731 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.02■□□□□ 0.32
KDELR3O43731 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDELR3O43731 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.02■□□□□ 0.31
KDELR3O43731 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
KDELR3O43731 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
KDELR3O43731 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.02■□□□□ 0.31
KDELR3O43731 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDELR3O43731 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.01■□□□□ 0.31
KDELR3O43731 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms