Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ABCC4O15439 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ABCC4O15439 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.32■■□□□ 1
ABCC4O15439 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ABCC4O15439 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ABCC4O15439 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.32■■□□□ 1
ABCC4O15439 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 BCRP1-201ENST00000444246 691 ntBASIC21.31■■□□□ 1
ABCC4O15439 AC112191.1-201ENST00000523689 701 ntBASIC21.31■■□□□ 1
ABCC4O15439 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.31■■□□□ 1
ABCC4O15439 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.31■■□□□ 1
ABCC4O15439 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.31■■□□□ 1
ABCC4O15439 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.31■■□□□ 1
ABCC4O15439 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.31■■□□□ 1
ABCC4O15439 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.31■■□□□ 1
ABCC4O15439 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ABCC4O15439 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.31■■□□□ 1
ABCC4O15439 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ABCC4O15439 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
ABCC4O15439 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ABCC4O15439 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCC4O15439 AC006538.1-201ENST00000567905 1585 ntBASIC21.31■■□□□ 1
ABCC4O15439 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.3■■□□□ 1
ABCC4O15439 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 AC087641.1-201ENST00000557561 1021 ntBASIC21.3■■□□□ 1
ABCC4O15439 AC093520.2-201ENST00000561830 333 ntBASIC21.3■■□□□ 1
ABCC4O15439 AC099522.2-201ENST00000607001 744 ntBASIC21.3■■□□□ 1
ABCC4O15439 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.3■■□□□ 1
ABCC4O15439 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.3■■□□□ 1
ABCC4O15439 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.3■■□□□ 1
ABCC4O15439 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ABCC4O15439 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ABCC4O15439 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCC4O15439 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 AL035633.1-201ENST00000406139 838 ntBASIC21.29■■□□□ 1
ABCC4O15439 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.29■■□□□ 1
ABCC4O15439 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.29■■□□□ 1
ABCC4O15439 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.29■■□□□ 1
ABCC4O15439 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.29■■□□□ 1
ABCC4O15439 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.29■■□□□ 1
ABCC4O15439 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.29■■□□□ 1
ABCC4O15439 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCC4O15439 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.29■■□□□ 1
ABCC4O15439 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
ABCC4O15439 LINC00628-201ENST00000628516 1289 ntBASIC21.29■■□□□ 1
ABCC4O15439 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.29■■□□□ 1
ABCC4O15439 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ABCC4O15439 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms