Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHD1O14646 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC26.7■■□□□ 1.86
CHD1O14646 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
CHD1O14646 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC26.7■■□□□ 1.86
CHD1O14646 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHD1O14646 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHD1O14646 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
CHD1O14646 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC26.69■■□□□ 1.86
CHD1O14646 BTBD6P1-201ENST00000412176 1267 ntBASIC26.69■■□□□ 1.86
CHD1O14646 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC26.69■■□□□ 1.86
CHD1O14646 AC253536.4-201ENST00000440539 267 ntBASIC26.69■■□□□ 1.86
CHD1O14646 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC26.69■■□□□ 1.86
CHD1O14646 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC26.69■■□□□ 1.86
CHD1O14646 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC26.69■■□□□ 1.86
CHD1O14646 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC26.69■■□□□ 1.86
CHD1O14646 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.69■■□□□ 1.86
CHD1O14646 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD1O14646 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC26.68■■□□□ 1.86
CHD1O14646 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHD1O14646 DPM2-202ENST00000373110 738 ntTSL 2 BASIC26.68■■□□□ 1.86
CHD1O14646 AC104457.1-201ENST00000401024 814 ntBASIC26.68■■□□□ 1.86
CHD1O14646 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC26.68■■□□□ 1.86
CHD1O14646 EIF4HP1-201ENST00000453115 687 ntBASIC26.68■■□□□ 1.86
CHD1O14646 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHD1O14646 HNRNPA1P13-201ENST00000510646 963 ntBASIC26.68■■□□□ 1.86
CHD1O14646 AC079316.1-201ENST00000548397 411 ntBASIC26.68■■□□□ 1.86
CHD1O14646 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC26.68■■□□□ 1.86
CHD1O14646 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC26.68■■□□□ 1.86
CHD1O14646 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHD1O14646 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CHD1O14646 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CHD1O14646 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHD1O14646 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CHD1O14646 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHD1O14646 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CHD1O14646 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC26.68■■□□□ 1.86
CHD1O14646 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHD1O14646 RN7SL399P-201ENST00000471648 279 ntBASIC26.68■■□□□ 1.86
CHD1O14646 AC091804.1-201ENST00000486888 567 ntBASIC26.68■■□□□ 1.86
CHD1O14646 SUOX-214ENST00000551841 906 ntTSL 3 BASIC26.68■■□□□ 1.86
CHD1O14646 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC26.67■■□□□ 1.86
CHD1O14646 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHD1O14646 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHD1O14646 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC26.67■■□□□ 1.86
CHD1O14646 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC26.67■■□□□ 1.86
CHD1O14646 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CHD1O14646 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
CHD1O14646 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHD1O14646 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CHD1O14646 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CHD1O14646 NUS1P3-201ENST00000423502 862 ntBASIC26.67■■□□□ 1.86
CHD1O14646 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC26.67■■□□□ 1.86
CHD1O14646 CHMP4BP1-201ENST00000556017 588 ntBASIC26.67■■□□□ 1.86
CHD1O14646 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC26.67■■□□□ 1.86
CHD1O14646 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CHD1O14646 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHD1O14646 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHD1O14646 DEK-201ENST00000244776 1441 ntTSL 2 BASIC26.66■■□□□ 1.86
CHD1O14646 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHD1O14646 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHD1O14646 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CHD1O14646 ZBTB12BP-201ENST00000314232 1122 ntBASIC26.66■■□□□ 1.86
CHD1O14646 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CHD1O14646 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
CHD1O14646 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHD1O14646 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
CHD1O14646 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC26.66■■□□□ 1.86
CHD1O14646 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHD1O14646 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
CHD1O14646 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC26.65■■□□□ 1.86
CHD1O14646 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CHD1O14646 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC26.65■■□□□ 1.86
CHD1O14646 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC26.65■■□□□ 1.86
CHD1O14646 AC104306.2-201ENST00000451877 341 ntBASIC26.65■■□□□ 1.86
CHD1O14646 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC26.65■■□□□ 1.86
CHD1O14646 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 KLK3-211ENST00000597483 810 ntTSL 2 BASIC26.65■■□□□ 1.86
CHD1O14646 AC133539.2-201ENST00000604757 467 ntBASIC26.65■■□□□ 1.86
CHD1O14646 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC26.65■■□□□ 1.86
CHD1O14646 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 INTS4P2-202ENST00000614726 2019 ntBASIC26.65■■□□□ 1.86
CHD1O14646 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC26.65■■□□□ 1.86
CHD1O14646 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CHD1O14646 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 KRT8P19-201ENST00000551916 1455 ntBASIC26.65■■□□□ 1.86
CHD1O14646 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC26.65■■□□□ 1.86
CHD1O14646 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms