Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC016027.1-202ENST00000607927 1699 ntBASIC16.41■□□□□ 0.22
C4orf47A7E2U8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 RNU1-129P-201ENST00000384064 167 ntBASIC16.41■□□□□ 0.22
C4orf47A7E2U8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 HLA-V-204ENST00000476601 1289 ntBASIC16.41■□□□□ 0.22
C4orf47A7E2U8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 U1.21-201ENST00000580816 167 ntBASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 AC007967.4-201ENST00000614700 386 ntBASIC16.41■□□□□ 0.22
C4orf47A7E2U8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 AP3S2-216ENST00000617003 1561 ntBASIC16.41■□□□□ 0.22
C4orf47A7E2U8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
C4orf47A7E2U8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 AC138028.4-201ENST00000564984 1845 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 DGCR5-201ENST00000399539 862 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 AC009477.1-201ENST00000452936 217 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ACA64.2-201ENST00000459014 129 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 RN7SL752P-201ENST00000463779 287 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 AC008738.7-201ENST00000609744 511 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 MIR6805-201ENST00000615055 62 ntBASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.4■□□□□ 0.22
C4orf47A7E2U8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
C4orf47A7E2U8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 HCG4-201ENST00000418983 998 ntBASIC16.39■□□□□ 0.21
C4orf47A7E2U8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 AC009407.1-201ENST00000568958 598 ntBASIC16.39■□□□□ 0.21
C4orf47A7E2U8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.39■□□□□ 0.21
C4orf47A7E2U8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.39■□□□□ 0.21
C4orf47A7E2U8 AL162274.1-201ENST00000617191 1098 ntBASIC16.39■□□□□ 0.21
C4orf47A7E2U8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
C4orf47A7E2U8 AC090340.1-201ENST00000620778 4980 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms