Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC66A2RUB6 AC093525.9-201ENST00000624961 1746 ntBASIC18.33■□□□□ 0.52
CCDC66A2RUB6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 RCN1P1-201ENST00000400413 996 ntBASIC18.33■□□□□ 0.52
CCDC66A2RUB6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC66A2RUB6 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.32■□□□□ 0.52
CCDC66A2RUB6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 SLC25A1P3-201ENST00000395415 828 ntBASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AK4P3-201ENST00000418260 669 ntBASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AC006011.2-201ENST00000621313 1158 ntBASIC18.32■□□□□ 0.52
CCDC66A2RUB6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AC046185.3-201ENST00000623228 1824 ntBASIC18.32■□□□□ 0.52
CCDC66A2RUB6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC66A2RUB6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms