Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ELK2BP-201ENST00000415014 1224 ntBASIC17.12■□□□□ 0.33
CCDC78A2IDD5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 AC139887.3-201ENST00000568585 713 ntBASIC17.12■□□□□ 0.33
CCDC78A2IDD5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 AL691432.3-201ENST00000621860 400 ntBASIC17.12■□□□□ 0.33
CCDC78A2IDD5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC78A2IDD5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 AC006504.4-201ENST00000592118 1568 ntBASIC17.11■□□□□ 0.33
CCDC78A2IDD5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 DUX4L17-201ENST00000557360 1267 ntBASIC17.11■□□□□ 0.33
CCDC78A2IDD5 AL589182.2-201ENST00000619332 1049 ntBASIC17.11■□□□□ 0.33
CCDC78A2IDD5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC78A2IDD5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 AC008894.3-201ENST00000624324 3103 ntBASIC17.1■□□□□ 0.33
CCDC78A2IDD5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 AC079781.3-201ENST00000449110 356 ntBASIC17.1■□□□□ 0.33
CCDC78A2IDD5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC78A2IDD5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms