Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 PMS2P4-201ENST00000412466 1052 ntBASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 BCRP1-201ENST00000444246 691 ntBASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 IGHV3-62-201ENST00000520057 340 ntBASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 Z92544.3-201ENST00000624747 417 ntBASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AP001350.2-201ENST00000625104 1094 ntBASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1G3Q9Y6M4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 SPCS2P4-201ENST00000436160 681 ntBASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 RNA5SP421-201ENST00000516864 134 ntBASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 LINC01225-203ENST00000563550 1244 ntBASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
CSNK1G3Q9Y6M4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 WASH6P-202ENST00000359512 1437 ntBASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 FAM58DP-201ENST00000428076 619 ntBASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 AC069262.1-201ENST00000539058 672 ntBASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms