Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 AL391069.4-201ENST00000609583 481 ntBASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 GGT4P-201ENST00000623672 1708 ntBASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 AC134043.2-201ENST00000624206 2238 ntBASIC25.04■■□□□ 1.6
CDC42BPBQ9Y5S2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 KRT17P8-201ENST00000540749 863 ntBASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 MIR658-201ENST00000385210 100 ntBASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 SPDYE17-201ENST00000412399 783 ntBASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 Six3os1_5.1-201ENST00000611000 271 ntBASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC25.03■■□□□ 1.6
CDC42BPBQ9Y5S2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 ANKRD19P-201ENST00000338192 862 ntBASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 SERBP1P3-201ENST00000459980 809 ntBASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 AL033527.5-202ENST00000641632 1098 ntBASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CDC42BPBQ9Y5S2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms