Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 AC078925.2-201ENST00000624013 1973 ntBASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 DUX4L17-201ENST00000557360 1267 ntBASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 IFNL4P1-201ENST00000607083 540 ntBASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 AC004706.3-202ENST00000621574 984 ntBASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 AC012313.10-201ENST00000623509 926 ntBASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 RNF216P1-203ENST00000404404 2427 ntBASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA11Q9Y5H2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 LAGE3P1-201ENST00000425356 484 ntBASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA11Q9Y5H2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms