Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC018845.2-201ENST00000568326 409 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AP002472.1-201ENST00000577490 586 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 MIR3197-201ENST00000582241 73 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AC004790.2-201ENST00000623588 572 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AC092865.6-201ENST00000642101 219 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 CYMP-203ENST00000474680 1263 ntBASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ALG1L5P-201ENST00000482043 771 ntBASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 RFPL4AP1-201ENST00000530883 850 ntBASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 ELL2P1-201ENST00000413990 1906 ntBASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB11Q9Y5F2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 AC106886.4-201ENST00000623557 2502 ntBASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 HCG4B-203ENST00000450128 991 ntBASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 AC124947.2-201ENST00000547118 1133 ntBASIC16.52■□□□□ 0.24
PCDHB11Q9Y5F2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms