Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SSX2IPQ9Y2D8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SSX2IPQ9Y2D8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX2IPQ9Y2D8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SSX2IPQ9Y2D8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX2IPQ9Y2D8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AC012313.1-201ENST00000593393 3059 ntBASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AL355306.1-201ENST00000415580 579 ntBASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 ADH5P3-201ENST00000433842 1137 ntBASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AC067863.1-201ENST00000494933 530 ntBASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AC005412.3-201ENST00000580309 715 ntBASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 AL161645.1-201ENST00000622716 1255 ntBASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX2IPQ9Y2D8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 SLC25A6P5-201ENST00000435663 894 ntBASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX2IPQ9Y2D8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 FAM86GP-201ENST00000448322 971 ntBASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 AC107918.2-201ENST00000530817 355 ntBASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 AC015911.4-201ENST00000588022 1070 ntBASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 AC009093.7-201ENST00000623853 1223 ntBASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 AKAP8P1-201ENST00000434743 1349 ntBASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SSX2IPQ9Y2D8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms