Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 FGFR3P6-201ENST00000457012 610 ntBASIC15.21■□□□□ 0.03
ZNF346Q9UL40 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 SART3-203ENST00000546611 1184 ntBASIC15.21■□□□□ 0.03
ZNF346Q9UL40 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 AL589182.2-201ENST00000619332 1049 ntBASIC15.21■□□□□ 0.03
ZNF346Q9UL40 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.21■□□□□ 0.02
ZNF346Q9UL40 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 RN7SL510P-201ENST00000581311 263 ntBASIC15.2■□□□□ 0.02
ZNF346Q9UL40 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 AC008608.2-201ENST00000606089 416 ntBASIC15.2■□□□□ 0.02
ZNF346Q9UL40 AL139424.1-201ENST00000607572 797 ntBASIC15.2■□□□□ 0.02
ZNF346Q9UL40 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 HLA-A-202ENST00000376806 1854 ntBASIC15.2■□□□□ 0.02
ZNF346Q9UL40 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF346Q9UL40 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 KRT8P49-201ENST00000604166 1432 ntBASIC15.19■□□□□ 0.02
ZNF346Q9UL40 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF346Q9UL40 AC139887.3-201ENST00000568585 713 ntBASIC15.19■□□□□ 0.02
ZNF346Q9UL40 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms