Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 AP002414.1-201ENST00000391405 1147 ntBASIC15.81■□□□□ 0.12
CNIH4Q9P003 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 KRT18P58-201ENST00000527480 1120 ntBASIC15.81■□□□□ 0.12
CNIH4Q9P003 SLC25A1P1-201ENST00000528351 927 ntBASIC15.81■□□□□ 0.12
CNIH4Q9P003 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 AC104109.2-201ENST00000602919 1418 ntBASIC15.81■□□□□ 0.12
CNIH4Q9P003 AC008667.4-201ENST00000607370 168 ntBASIC15.81■□□□□ 0.12
CNIH4Q9P003 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH4Q9P003 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH4Q9P003 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 AC092171.3-201ENST00000610122 2651 ntBASIC15.8■□□□□ 0.12
CNIH4Q9P003 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 AL591424.1-201ENST00000442569 1213 ntBASIC15.8■□□□□ 0.12
CNIH4Q9P003 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH4Q9P003 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH4Q9P003 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH4Q9P003 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH4Q9P003 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH4Q9P003 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH4Q9P003 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CNIH4Q9P003 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms