Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AC005829.1-201ENST00000570002 483 ntBASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPHK1Q9NYA1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AL391256.1-201ENST00000443260 1855 ntBASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AC006538.3-201ENST00000612495 578 ntBASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AC139530.3-201ENST00000620344 690 ntBASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 AC092902.6-201ENST00000641783 218 ntBASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 RNF216P1-203ENST00000404404 2427 ntBASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SPHK1Q9NYA1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 LINC00895-201ENST00000629028 1637 ntBASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms