Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 AC129492.6-201ENST00000611383 1305 ntBASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PARPBPQ9NWS1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 CRYGEP-201ENST00000412192 528 ntBASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 AC108073.2-201ENST00000464002 357 ntBASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 AC010654.1-201ENST00000615722 808 ntBASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PARPBPQ9NWS1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 AC009947.1-201ENST00000444350 727 ntBASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 TUBB7P-202ENST00000428444 1305 ntBASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 FRMD8P1-201ENST00000440433 1524 ntBASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PARPBPQ9NWS1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 AC104109.2-201ENST00000602919 1418 ntBASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 PCDHA12-202ENST00000613593 2588 ntBASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.11■□□□□ 0.01
PARPBPQ9NWS1 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms