Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 AC055717.3-201ENST00000622967 595 ntBASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 OR6D1P-203ENST00000641209 4860 ntBASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF304Q9HCX3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AL021920.2-201ENST00000624828 1351 ntBASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 PP12613-201ENST00000424958 2230 ntBASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 MKNK2P1-201ENST00000437526 628 ntBASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AL691403.2-201ENST00000618460 490 ntBASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 AL645728.2-201ENST00000641974 660 ntBASIC16.02■□□□□ 0.16
ZNF304Q9HCX3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF304Q9HCX3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 HTR5BP-201ENST00000430851 1154 ntBASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 MIR4515-201ENST00000584082 81 ntBASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 AC068137.2-201ENST00000605408 478 ntBASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF304Q9HCX3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms