Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 AL513480.1-201ENST00000451731 511 ntBASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 HLA-J-203ENST00000494367 1087 ntBASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 AC107918.2-201ENST00000530817 355 ntBASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 AC009093.7-201ENST00000623853 1223 ntBASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 AC129492.6-201ENST00000611383 1305 ntBASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPAP1Q9BWH6 PCDHB19P-201ENST00000570871 2371 ntBASIC20.39■□□□□ 0.86
RPAP1Q9BWH6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.39■□□□□ 0.86
RPAP1Q9BWH6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPAP1Q9BWH6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.39■□□□□ 0.86
RPAP1Q9BWH6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 AL355306.1-201ENST00000415580 579 ntBASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 FAM8A3P-201ENST00000427218 844 ntBASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 AC099522.2-201ENST00000607001 744 ntBASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPAP1Q9BWH6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 PCDHA14-201ENST00000506751 2298 ntBASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPAP1Q9BWH6 RNF216P1-203ENST00000404404 2427 ntBASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 AC015911.4-201ENST00000588022 1070 ntBASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPAP1Q9BWH6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms