Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TMEM47Q9BQJ4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TMEM47Q9BQJ4 AC016027.1-202ENST00000607927 1699 ntBASIC19.52■□□□□ 0.71
TMEM47Q9BQJ4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AP002490.2-201ENST00000524791 560 ntBASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AC093520.2-201ENST00000561830 333 ntBASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AC004835.2-201ENST00000603762 682 ntBASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 AC021097.1-201ENST00000607902 574 ntBASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM47Q9BQJ4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 RN7SL589P-201ENST00000481268 310 ntBASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 RNF216P1-203ENST00000404404 2427 ntBASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 AC090340.1-201ENST00000620778 4980 ntBASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM47Q9BQJ4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 AL603756.1-201ENST00000606511 2163 ntBASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 AC022211.2-201ENST00000585075 2527 ntBASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM47Q9BQJ4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms