Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 AC007064.4-201ENST00000637740 555 ntBASIC17.45■□□□□ 0.38
HAPLN3Q96S86 AL645728.2-201ENST00000641974 660 ntBASIC17.45■□□□□ 0.38
HAPLN3Q96S86 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 AL391256.1-201ENST00000443260 1855 ntBASIC17.45■□□□□ 0.38
HAPLN3Q96S86 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
HAPLN3Q96S86 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AC087641.1-201ENST00000557561 1021 ntBASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AL671883.3-201ENST00000603274 991 ntBASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AC023141.13-201ENST00000604991 943 ntBASIC17.44■□□□□ 0.38
HAPLN3Q96S86 AP001350.2-201ENST00000625104 1094 ntBASIC17.44■□□□□ 0.38
HAPLN3Q96S86 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HAPLN3Q96S86 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 AC012569.1-201ENST00000591191 1524 ntBASIC17.43■□□□□ 0.38
HAPLN3Q96S86 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 AL139011.1-202ENST00000642063 584 ntBASIC17.43■□□□□ 0.38
HAPLN3Q96S86 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 AC103702.1-201ENST00000548801 2630 ntBASIC17.43■□□□□ 0.38
HAPLN3Q96S86 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 PCDH8P1-201ENST00000428983 2773 ntBASIC17.43■□□□□ 0.38
HAPLN3Q96S86 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HAPLN3Q96S86 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms