Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AC087499.6-201ENST00000411576 835 ntBASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 RPL37AP1-201ENST00000412502 279 ntBASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AC015936.2-201ENST00000593177 259 ntBASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 BANF1P1-201ENST00000553684 263 ntBASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AC105129.2-201ENST00000559536 390 ntBASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.19□□□□□ -0.14
CSMD1Q96PZ7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 RPS2P36-201ENST00000456516 831 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC135050.7-201ENST00000624508 2218 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC093004.1-201ENST00000508850 424 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 BTBD6P1-201ENST00000412176 1267 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC099336.1-201ENST00000417053 1171 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC108725.1-201ENST00000495472 409 ntBASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CSMD1Q96PZ7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AL355312.1-201ENST00000407115 2176 ntBASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms