Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.01□□□□□ -0.17
GAFA1Q96PS6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 MIR4515-201ENST00000584082 81 ntBASIC14.01□□□□□ -0.17
GAFA1Q96PS6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.01□□□□□ -0.17
GAFA1Q96PS6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 AC007064.4-201ENST00000637740 555 ntBASIC14.01□□□□□ -0.17
GAFA1Q96PS6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 FLJ38576-201ENST00000623820 2459 ntBASIC14.01□□□□□ -0.17
GAFA1Q96PS6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14□□□□□ -0.17
GAFA1Q96PS6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 BCAR1-209ENST00000546196 1340 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14□□□□□ -0.17
GAFA1Q96PS6 MIR574-201ENST00000385209 96 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 MIR940-201ENST00000401276 94 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 DDT-204ENST00000404092 805 ntTSL 3 BASIC14□□□□□ -0.17
GAFA1Q96PS6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
GAFA1Q96PS6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 KRT18P58-201ENST00000527480 1120 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
GAFA1Q96PS6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
GAFA1Q96PS6 SIGLEC29P-201ENST00000599873 1114 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14□□□□□ -0.17
GAFA1Q96PS6 AC023141.13-201ENST00000604991 943 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 AC004877.2-201ENST00000623941 599 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 AL645728.2-201ENST00000641974 660 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 AL139011.1-202ENST00000642063 584 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 SNX33P1-201ENST00000592116 1762 ntBASIC14□□□□□ -0.17
GAFA1Q96PS6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14□□□□□ -0.17
GAFA1Q96PS6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14□□□□□ -0.17
GAFA1Q96PS6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GAFA1Q96PS6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms