Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RPRD1AQ96P16 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 HMGA1P7-201ENST00000406908 502 ntBASIC17.35■□□□□ 0.37
RPRD1AQ96P16 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.35■□□□□ 0.37
RPRD1AQ96P16 AC080080.1-201ENST00000625121 2420 ntBASIC17.35■□□□□ 0.37
RPRD1AQ96P16 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 UPF3AP3-201ENST00000420996 769 ntBASIC17.34■□□□□ 0.37
RPRD1AQ96P16 GPX1P2-201ENST00000429271 606 ntBASIC17.34■□□□□ 0.37
RPRD1AQ96P16 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 AC092919.2-201ENST00000623631 1645 ntBASIC17.34■□□□□ 0.37
RPRD1AQ96P16 AC005915.1-201ENST00000624912 2018 ntBASIC17.34■□□□□ 0.37
RPRD1AQ96P16 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPRD1AQ96P16 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPRD1AQ96P16 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 AP002490.2-201ENST00000524791 560 ntBASIC17.33■□□□□ 0.36
RPRD1AQ96P16 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 CYP2A7P1-201ENST00000595391 815 ntBASIC17.33■□□□□ 0.36
RPRD1AQ96P16 AL078644.1-201ENST00000609881 752 ntBASIC17.33■□□□□ 0.36
RPRD1AQ96P16 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms