Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 AP000347.1-202ENST00000435868 847 ntBASIC17.66■□□□□ 0.42
RNF34Q969K3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF34Q969K3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF34Q969K3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF34Q969K3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RNF34Q969K3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF34Q969K3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF34Q969K3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF34Q969K3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF34Q969K3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF34Q969K3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF34Q969K3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF34Q969K3 PMS2P1-201ENST00000431037 1228 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF34Q969K3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF34Q969K3 RNA5SP416-201ENST00000516838 111 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF34Q969K3 KRT18P58-201ENST00000527480 1120 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF34Q969K3 AC140113.2-201ENST00000604370 208 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 AC064836.3-201ENST00000607928 673 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 TUBB7P-202ENST00000428444 1305 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.65■□□□□ 0.42
RNF34Q969K3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF34Q969K3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF34Q969K3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF34Q969K3 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.42
RNF34Q969K3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF34Q969K3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF34Q969K3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF34Q969K3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF34Q969K3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF34Q969K3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF34Q969K3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 AL591424.1-201ENST00000442569 1213 ntBASIC17.64■□□□□ 0.41
RNF34Q969K3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF34Q969K3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 OR7E47P-204ENST00000575924 449 ntBASIC17.64■□□□□ 0.41
RNF34Q969K3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF34Q969K3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF34Q969K3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF34Q969K3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF34Q969K3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF34Q969K3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF34Q969K3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF34Q969K3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF34Q969K3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 PKD1P5-201ENST00000532415 10291 ntBASIC17.63■□□□□ 0.41
RNF34Q969K3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 MIR574-201ENST00000385209 96 ntBASIC17.63■□□□□ 0.41
RNF34Q969K3 KRT18P3-201ENST00000451602 1288 ntBASIC17.63■□□□□ 0.41
RNF34Q969K3 CXCL1P1-201ENST00000502804 216 ntBASIC17.63■□□□□ 0.41
RNF34Q969K3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF34Q969K3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF34Q969K3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms