Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 AC073439.1-201ENST00000624121 1774 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 TUBB8P12-201ENST00000308911 1335 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 TUBB7P-202ENST00000428444 1305 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 TUBB8P7-204ENST00000567960 1332 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 FAM220BP-201ENST00000377689 816 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 AL596325.1-201ENST00000563991 1082 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 SPTSSB-204ENST00000617024 1292 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 LINC02012-201ENST00000608206 1725 ntBASIC21.92■■□□□ 1.1
RAPGEF4Q8WZA2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 RN7SL692P-201ENST00000464677 288 ntBASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 AC124947.2-201ENST00000547118 1133 ntBASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF4Q8WZA2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 MTND6P24-201ENST00000440466 518 ntBASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 AC009477.1-201ENST00000452936 217 ntBASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 TEX28P1-201ENST00000613479 1221 ntBASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 TEX28P2-201ENST00000617764 1221 ntBASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms