Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC103564.2-201ENST00000432853 1299 ntBASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC012615.1-201ENST00000565797 1299 ntBASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC011467.2-201ENST00000598425 242 ntBASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC132872.4-202ENST00000622924 2756 ntBASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 TP73-AS1-210ENST00000637775 1455 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AC092364.2-201ENST00000596710 2692 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AC063926.3-201ENST00000624734 5658 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 IGHV3-47-201ENST00000425060 335 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AC096582.2-201ENST00000510860 516 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AC109462.3-201ENST00000573934 613 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 AC019129.2-201ENST00000609837 1235 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 HYMAI-201ENST00000635591 3347 ntBASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTN4IP1Q8WWV3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms