Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 AC079776.2-201ENST00000641154 1609 ntBASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 FAM86EP-206ENST00000510506 987 ntBASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 SNX33P1-201ENST00000592116 1762 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AL596087.1-201ENST00000400979 1969 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 POM121L3P-201ENST00000419331 1163 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 ABCD1P5-201ENST00000445663 754 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AP002414.4-201ENST00000589764 1148 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AL353135.1-201ENST00000606729 504 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AC116407.4-201ENST00000623319 1061 ntBASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC44A1Q8WWI5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms