Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 HLA-V-204ENST00000476601 1289 ntBASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 HILS1-202ENST00000545329 423 ntBASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 MIR3909-201ENST00000579518 119 ntBASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 HCG4-201ENST00000418983 998 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 GIMAP3P-201ENST00000495150 836 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AC010336.2-201ENST00000564226 506 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AC140912.1-201ENST00000577171 1054 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AC017083.2-201ENST00000608069 979 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AC018529.1-201ENST00000613063 361 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 AL138828.2-201ENST00000615812 383 ntBASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNIP1Q8TAD8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AP000997.3-201ENST00000623333 2250 ntBASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AL353779.1-201ENST00000434793 351 ntBASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms