Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 KRT18P67-201ENST00000432816 1264 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 HNRNPDP1-201ENST00000439535 754 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AC079781.3-201ENST00000449110 356 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AC018712.1-201ENST00000455767 687 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 GGTLC5P-201ENST00000617623 998 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AL691432.3-201ENST00000621860 400 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 AC008735.5-201ENST00000623544 497 ntBASIC15.8■□□□□ 0.12
NUP43Q8NFH3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUP43Q8NFH3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 RPS2P28-201ENST00000314255 741 ntBASIC15.79■□□□□ 0.12
NUP43Q8NFH3 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 SLC25A6P2-201ENST00000497974 877 ntBASIC15.79■□□□□ 0.12
NUP43Q8NFH3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 AC105339.3-201ENST00000560043 636 ntBASIC15.79■□□□□ 0.12
NUP43Q8NFH3 AC013467.2-201ENST00000605472 835 ntBASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.79■□□□□ 0.12
NUP43Q8NFH3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 AC079328.2-201ENST00000561241 3354 ntBASIC15.78■□□□□ 0.12
NUP43Q8NFH3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.78■□□□□ 0.12
NUP43Q8NFH3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUP43Q8NFH3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms