Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FRMD8P1-201ENST00000440433 1524 ntBASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 MCCD1P2-201ENST00000423228 335 ntBASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 AC124947.2-201ENST00000547118 1133 ntBASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 KRT19P2-202ENST00000557173 1012 ntBASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 PDPK2P-202ENST00000562415 1191 ntBASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 AC092865.6-201ENST00000642101 219 ntBASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH20Q8N6Y1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 AL513190.1-201ENST00000621254 727 ntBASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH20Q8N6Y1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AC025580.3-201ENST00000617932 1424 ntBASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms