Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 LINC00304-203ENST00000565008 1864 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 AC241585.1-201ENST00000433527 519 ntBASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 CR383656.12-201ENST00000549567 513 ntBASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 AL031055.1-201ENST00000606362 631 ntBASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 TOP3BP1-201ENST00000420768 1380 ntBASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPOQ8N3V7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.08■□□□□ 0.33
SYNPOQ8N3V7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 AL645608.8-201ENST00000606034 2086 ntBASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPOQ8N3V7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 CRB3P1-201ENST00000449338 276 ntBASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 AC009118.2-201ENST00000613275 655 ntBASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SYNPOQ8N3V7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms