Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.23■□□□□ 0.35
SIX5Q8N196 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.23■□□□□ 0.35
SIX5Q8N196 AC003101.2-201ENST00000612557 442 ntBASIC17.23■□□□□ 0.35
SIX5Q8N196 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.23■□□□□ 0.35
SIX5Q8N196 AL138828.2-201ENST00000615812 383 ntBASIC17.23■□□□□ 0.35
SIX5Q8N196 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIX5Q8N196 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.23■□□□□ 0.35
SIX5Q8N196 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 AC093503.3-201ENST00000624917 2352 ntBASIC17.23■□□□□ 0.35
SIX5Q8N196 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIX5Q8N196 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.23■□□□□ 0.35
SIX5Q8N196 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIX5Q8N196 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SIX5Q8N196 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SIX5Q8N196 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SIX5Q8N196 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.22■□□□□ 0.35
SIX5Q8N196 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.22■□□□□ 0.35
SIX5Q8N196 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.22■□□□□ 0.35
SIX5Q8N196 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 TP53TG3HP-202ENST00000569755 579 ntBASIC17.22■□□□□ 0.35
SIX5Q8N196 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 AC018529.1-201ENST00000613063 361 ntBASIC17.22■□□□□ 0.35
SIX5Q8N196 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SIX5Q8N196 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SIX5Q8N196 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIX5Q8N196 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 REXO1L11P-201ENST00000620964 1927 ntBASIC17.21■□□□□ 0.35
SIX5Q8N196 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SIX5Q8N196 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.21■□□□□ 0.35
SIX5Q8N196 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SIX5Q8N196 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SIX5Q8N196 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.21■□□□□ 0.35
SIX5Q8N196 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.21■□□□□ 0.35
SIX5Q8N196 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms