Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AC100757.3-201ENST00000622361 1406 ntBASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AC091167.2-201ENST00000579581 588 ntBASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AL008721.1-201ENST00000609964 604 ntBASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AL662799.1-202ENST00000614205 422 ntBASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AP001350.2-201ENST00000625104 1094 ntBASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AC025048.6-201ENST00000634326 1161 ntBASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AL358472.5-202ENST00000641448 1267 ntBASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEFF1Q8IYR6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 PIN1P1-201ENST00000412108 996 ntBASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 AC009118.2-201ENST00000613275 655 ntBASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEFF1Q8IYR6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms