Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC60Q8IWA6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 AL355385.1-201ENST00000606123 409 ntBASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC60Q8IWA6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 AC021097.1-201ENST00000607902 574 ntBASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 LINC00628-201ENST00000628516 1289 ntBASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC60Q8IWA6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC60Q8IWA6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC60Q8IWA6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC60Q8IWA6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC60Q8IWA6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC60Q8IWA6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.64■□□□□ 0.58
CCDC60Q8IWA6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 AC012313.1-201ENST00000593393 3059 ntBASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 KRT18P32-201ENST00000424695 1287 ntBASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 AL645939.2-201ENST00000427340 991 ntBASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 GPS2P2-201ENST00000430745 888 ntBASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 CYMP-203ENST00000474680 1263 ntBASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC60Q8IWA6 AL391256.1-201ENST00000443260 1855 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms