Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 GNAQP1-201ENST00000444815 1067 ntBASIC17.1■□□□□ 0.33
DENND4AQ7Z401 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 AC044860.1-202ENST00000559481 777 ntBASIC17.1■□□□□ 0.33
DENND4AQ7Z401 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 AL162274.1-201ENST00000617191 1098 ntBASIC17.1■□□□□ 0.33
DENND4AQ7Z401 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AL023806.1-201ENST00000603994 1649 ntBASIC17.09■□□□□ 0.33
DENND4AQ7Z401 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.09■□□□□ 0.33
DENND4AQ7Z401 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AC007541.1-201ENST00000570282 1469 ntBASIC17.09■□□□□ 0.33
DENND4AQ7Z401 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DENND4AQ7Z401 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 MIR658-201ENST00000385210 100 ntBASIC17.08■□□□□ 0.33
DENND4AQ7Z401 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 USP32P1-208ENST00000506594 1164 ntBASIC17.08■□□□□ 0.33
DENND4AQ7Z401 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.08■□□□□ 0.33
DENND4AQ7Z401 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DENND4AQ7Z401 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.07■□□□□ 0.32
DENND4AQ7Z401 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DENND4AQ7Z401 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.07■□□□□ 0.32
DENND4AQ7Z401 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.07■□□□□ 0.32
DENND4AQ7Z401 KRT17P8-201ENST00000540749 863 ntBASIC17.07■□□□□ 0.32
DENND4AQ7Z401 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms