Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD3Q7Z3D4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 UBALD1-205ENST00000590891 2641 ntBASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 AC140113.2-201ENST00000604370 208 ntBASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 AC027601.4-201ENST00000611259 610 ntBASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 ACTL9-202ENST00000612068 1252 ntBASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD3Q7Z3D4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 MED15P5-201ENST00000423150 992 ntBASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 CXCL1P1-201ENST00000502804 216 ntBASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AC010507.1-201ENST00000633895 436 ntBASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 AC106886.4-201ENST00000623557 2502 ntBASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD3Q7Z3D4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms