Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
NHLRC1Q6VVB1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
NHLRC1Q6VVB1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NHLRC1Q6VVB1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.2■□□□□ 0.02
NHLRC1Q6VVB1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.2■□□□□ 0.02
NHLRC1Q6VVB1 RNF216P1-203ENST00000404404 2427 ntBASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 AC068418.2-201ENST00000577309 3703 ntBASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 FAAHP1-202ENST00000446499 1238 ntBASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 OR7E14P-202ENST00000530490 1290 ntBASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 AL805961.1-202ENST00000641562 540 ntBASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NHLRC1Q6VVB1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 ELK2BP-201ENST00000415014 1224 ntBASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 KRT18P67-201ENST00000432816 1264 ntBASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 AL160237.2-201ENST00000556165 472 ntBASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 AC006557.2-201ENST00000592985 1240 ntBASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 AC008735.5-201ENST00000623544 497 ntBASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NHLRC1Q6VVB1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AL645728.1-201ENST00000366221 2101 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms