Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 AC108860.2-201ENST00000562760 2183 ntBASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 AL354751.1-201ENST00000412768 1863 ntBASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 MIR1247-201ENST00000408206 136 ntBASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 RNA5SP412-201ENST00000516234 123 ntBASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 AC103810.3-201ENST00000583567 96 ntBASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 RETN-203ENST00000629642 400 ntTSL 5 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 ABALON-201ENST00000629058 1903 ntBASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 RHOQP1-201ENST00000555758 579 ntBASIC27.06■■□□□ 1.92
SNAPC4Q5SXM2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 KLF2P4-201ENST00000451959 1225 ntBASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNAPC4Q5SXM2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 BRWD1P1-201ENST00000401091 371 ntBASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 RNA5SP423-201ENST00000517127 109 ntBASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 AC074044.1-201ENST00000609673 707 ntBASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
SNAPC4Q5SXM2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 CSF2RBP1-201ENST00000447905 391 ntBASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNAPC4Q5SXM2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 AC133963.1-201ENST00000504166 1679 ntBASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
SNAPC4Q5SXM2 AC005229.1-201ENST00000392885 409 ntBASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms