Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC090340.1-201ENST00000620778 4980 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC141586.5-201ENST00000624546 2050 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC138761.1-201ENST00000584393 385 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 AP001059.3-201ENST00000619053 235 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC008267.7-201ENST00000624570 1194 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC084121.4-201ENST00000641598 221 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 AF228730.8-201ENST00000642140 221 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 LINC00895-201ENST00000629028 1637 ntBASIC17.8■□□□□ 0.44
VARS2Q5ST30 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 AL512356.2-201ENST00000546955 174 ntBASIC17.79■□□□□ 0.44
VARS2Q5ST30 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 AC027307.2-201ENST00000591252 911 ntBASIC17.79■□□□□ 0.44
VARS2Q5ST30 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 AC021097.1-201ENST00000607902 574 ntBASIC17.79■□□□□ 0.44
VARS2Q5ST30 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VARS2Q5ST30 AC092068.3-201ENST00000587894 2016 ntBASIC17.79■□□□□ 0.44
VARS2Q5ST30 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
VARS2Q5ST30 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 CNN2P2-201ENST00000443536 909 ntBASIC17.78■□□□□ 0.44
VARS2Q5ST30 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 CNN2P3-201ENST00000450201 906 ntBASIC17.78■□□□□ 0.44
VARS2Q5ST30 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 AC067863.1-201ENST00000494933 530 ntBASIC17.78■□□□□ 0.44
VARS2Q5ST30 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VARS2Q5ST30 SLC25A39P2-201ENST00000537614 270 ntBASIC17.78■□□□□ 0.44
VARS2Q5ST30 AC069262.1-201ENST00000539058 672 ntBASIC17.78■□□□□ 0.44
VARS2Q5ST30 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VARS2Q5ST30 AL136317.3-201ENST00000618497 906 ntBASIC17.78■□□□□ 0.44
VARS2Q5ST30 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms