Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 HLA-J-202ENST00000469281 1241 ntBASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 AC120114.3-201ENST00000611923 658 ntBASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 AC010507.1-201ENST00000633895 436 ntBASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN20Q4JDL3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 AC087641.1-201ENST00000557561 1021 ntBASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN20Q4JDL3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.71■□□□□ 0.42
PTPN20Q4JDL3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PTPN20Q4JDL3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 AL512652.2-201ENST00000625156 1716 ntBASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 HCG4-201ENST00000418983 998 ntBASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN20Q4JDL3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 AC124067.4-201ENST00000519691 2379 ntBASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms