Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 RNA5SP421-201ENST00000516864 134 ntBASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 MRPS18AP1-201ENST00000414458 589 ntBASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 AC124947.2-201ENST00000547118 1133 ntBASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 AC006277.1-201ENST00000624348 1610 ntBASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHROOM1Q2M3G4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AC138932.1-201ENST00000534164 6830 ntBASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 SPDYE7P-202ENST00000420373 878 ntBASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AC069120.2-201ENST00000524091 540 ntBASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 RARRES2P9-201ENST00000565168 469 ntBASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AC073389.1-201ENST00000595595 795 ntBASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AC021097.1-201ENST00000607902 574 ntBASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.52■□□□□ 0.72
SHROOM1Q2M3G4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SHROOM1Q2M3G4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHROOM1Q2M3G4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHROOM1Q2M3G4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
SHROOM1Q2M3G4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.52■□□□□ 0.71
SHROOM1Q2M3G4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHROOM1Q2M3G4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms