Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX7Q2KHR2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RFX7Q2KHR2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFX7Q2KHR2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFX7Q2KHR2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.27■□□□□ 0.83
RFX7Q2KHR2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
RFX7Q2KHR2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFX7Q2KHR2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.26■□□□□ 0.83
RFX7Q2KHR2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 AC012569.1-201ENST00000591191 1524 ntBASIC20.26■□□□□ 0.83
RFX7Q2KHR2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX7Q2KHR2 FLJ38576-201ENST00000623820 2459 ntBASIC20.25■□□□□ 0.83
RFX7Q2KHR2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 RNU1-129P-201ENST00000384064 167 ntBASIC20.25■□□□□ 0.83
RFX7Q2KHR2 HMGA1P7-201ENST00000406908 502 ntBASIC20.25■□□□□ 0.83
RFX7Q2KHR2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 U1.21-201ENST00000580816 167 ntBASIC20.25■□□□□ 0.83
RFX7Q2KHR2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 AC011676.5-201ENST00000624864 2660 ntBASIC20.25■□□□□ 0.83
RFX7Q2KHR2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX7Q2KHR2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 LINC02084-201ENST00000606069 1096 ntBASIC20.24■□□□□ 0.83
RFX7Q2KHR2 AC026120.1-201ENST00000611536 926 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms