Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 TUBB7P-202ENST00000428444 1305 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 TUBB8P7-204ENST00000567960 1332 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
SPCS3P61009 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.8□□□□□ -0.2
SPCS3P61009 AL353593.2-201ENST00000602529 1483 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.8□□□□□ -0.2
SPCS3P61009 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.79□□□□□ -0.2
SPCS3P61009 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.79□□□□□ -0.2
SPCS3P61009 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SPCS3P61009 AC092647.4-201ENST00000457211 535 ntBASIC13.79□□□□□ -0.2
SPCS3P61009 RN7SL606P-201ENST00000472779 293 ntBASIC13.79□□□□□ -0.2
SPCS3P61009 AC011840.4-201ENST00000578471 627 ntBASIC13.79□□□□□ -0.2
SPCS3P61009 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.79□□□□□ -0.2
SPCS3P61009 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.79□□□□□ -0.2
SPCS3P61009 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.79□□□□□ -0.2
SPCS3P61009 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 AC092171.3-201ENST00000610122 2651 ntBASIC13.79□□□□□ -0.2
SPCS3P61009 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS3P61009 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS3P61009 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.78□□□□□ -0.2
SPCS3P61009 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 AC026691.1-201ENST00000602502 2017 ntBASIC13.78□□□□□ -0.2
SPCS3P61009 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 AC003669.1-201ENST00000334569 611 ntBASIC13.78□□□□□ -0.2
SPCS3P61009 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.78□□□□□ -0.2
SPCS3P61009 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SPCS3P61009 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 AC124864.1-201ENST00000623408 392 ntBASIC13.78□□□□□ -0.2
SPCS3P61009 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 AC073508.3-201ENST00000619697 1419 ntBASIC13.78□□□□□ -0.2
SPCS3P61009 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.78□□□□□ -0.2
SPCS3P61009 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms