Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXG1P55316 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXG1P55316 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXG1P55316 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.76□□□□□ -0.05
FOXG1P55316 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
FOXG1P55316 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.76□□□□□ -0.05
FOXG1P55316 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
FOXG1P55316 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXG1P55316 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
FOXG1P55316 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 UBALD1-205ENST00000590891 2641 ntBASIC14.75□□□□□ -0.05
FOXG1P55316 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 HCG4-201ENST00000418983 998 ntBASIC14.75□□□□□ -0.05
FOXG1P55316 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 HTR5BP-201ENST00000430851 1154 ntBASIC14.75□□□□□ -0.05
FOXG1P55316 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.75□□□□□ -0.05
FOXG1P55316 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.75□□□□□ -0.05
FOXG1P55316 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.75□□□□□ -0.05
FOXG1P55316 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
FOXG1P55316 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 AC139530.3-201ENST00000620344 690 ntBASIC14.75□□□□□ -0.05
FOXG1P55316 AC092902.6-201ENST00000641783 218 ntBASIC14.75□□□□□ -0.05
FOXG1P55316 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.75□□□□□ -0.05
FOXG1P55316 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
FOXG1P55316 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 AC011676.5-201ENST00000624864 2660 ntBASIC14.75□□□□□ -0.05
FOXG1P55316 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXG1P55316 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXG1P55316 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXG1P55316 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FOXG1P55316 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 AC092171.3-201ENST00000610122 2651 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
FOXG1P55316 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 MIR1233-2-201ENST00000408138 82 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 MIR1233-1-201ENST00000408722 82 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXG1P55316 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXG1P55316 AC140658.5-201ENST00000438532 169 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
FOXG1P55316 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.74□□□□□ -0.05
FOXG1P55316 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
FOXG1P55316 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.74□□□□□ -0.05
FOXG1P55316 AC005829.1-201ENST00000570002 483 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 AC006538.3-201ENST00000612495 578 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
FOXG1P55316 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
FOXG1P55316 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
FOXG1P55316 AD000864.1-201ENST00000624076 2295 ntBASIC14.74□□□□□ -0.05
FOXG1P55316 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXG1P55316 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXG1P55316 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
FOXG1P55316 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
FOXG1P55316 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXG1P55316 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
FOXG1P55316 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms