Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.74■□□□□ 0.11
PSMD4P55036 AL031284.1-201ENST00000419297 478 ntBASIC15.74■□□□□ 0.11
PSMD4P55036 RPS15P9-201ENST00000494093 319 ntBASIC15.74■□□□□ 0.11
PSMD4P55036 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.74■□□□□ 0.11
PSMD4P55036 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
PSMD4P55036 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.74■□□□□ 0.11
PSMD4P55036 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 AP001005.1-201ENST00000571755 1248 ntBASIC15.74■□□□□ 0.11
PSMD4P55036 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
PSMD4P55036 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 FAM215A-202ENST00000632077 792 ntBASIC15.74■□□□□ 0.11
PSMD4P55036 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PSMD4P55036 AL513477.1-201ENST00000602865 2407 ntBASIC15.74■□□□□ 0.11
PSMD4P55036 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PSMD4P55036 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.74■□□□□ 0.11
PSMD4P55036 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 AL391005.1-201ENST00000623953 2435 ntBASIC15.73■□□□□ 0.11
PSMD4P55036 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 AC073621.1-201ENST00000392730 636 ntBASIC15.73■□□□□ 0.11
PSMD4P55036 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.73■□□□□ 0.11
PSMD4P55036 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.73■□□□□ 0.11
PSMD4P55036 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.73■□□□□ 0.11
PSMD4P55036 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.73■□□□□ 0.11
PSMD4P55036 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PSMD4P55036 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PSMD4P55036 AC092068.3-201ENST00000587894 2016 ntBASIC15.73■□□□□ 0.11
PSMD4P55036 AC005915.1-201ENST00000624912 2018 ntBASIC15.73■□□□□ 0.11
PSMD4P55036 AC084018.2-201ENST00000613093 2607 ntBASIC15.73■□□□□ 0.11
PSMD4P55036 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.73■□□□□ 0.11
PSMD4P55036 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PSMD4P55036 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.72■□□□□ 0.11
PSMD4P55036 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
PSMD4P55036 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms