Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PDE1AP54750 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE1AP54750 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 VN2R19P-201ENST00000442399 1052 ntBASIC20.55■□□□□ 0.88
PDE1AP54750 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 AC087641.1-201ENST00000557561 1021 ntBASIC20.55■□□□□ 0.88
PDE1AP54750 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 MIR4751-201ENST00000578027 74 ntBASIC20.55■□□□□ 0.88
PDE1AP54750 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.55■□□□□ 0.88
PDE1AP54750 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1AP54750 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDE1AP54750 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDE1AP54750 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.54■□□□□ 0.88
PDE1AP54750 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PDE1AP54750 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDE1AP54750 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDE1AP54750 AL031731.1-201ENST00000642131 2094 ntBASIC20.54■□□□□ 0.88
PDE1AP54750 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE1AP54750 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE1AP54750 GGT4P-201ENST00000623672 1708 ntBASIC20.54■□□□□ 0.88
PDE1AP54750 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDE1AP54750 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.54■□□□□ 0.88
PDE1AP54750 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE1AP54750 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE1AP54750 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE1AP54750 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDE1AP54750 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDE1AP54750 AC005052.1-201ENST00000625181 2492 ntBASIC20.54■□□□□ 0.88
PDE1AP54750 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
PDE1AP54750 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1AP54750 AC006449.5-201ENST00000610658 2098 ntBASIC20.54■□□□□ 0.88
PDE1AP54750 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE1AP54750 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE1AP54750 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE1AP54750 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
PDE1AP54750 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE1AP54750 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 HCG4-201ENST00000418983 998 ntBASIC20.53■□□□□ 0.88
PDE1AP54750 HCG4B-203ENST00000450128 991 ntBASIC20.53■□□□□ 0.88
PDE1AP54750 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PDE1AP54750 CXCL1P1-201ENST00000502804 216 ntBASIC20.53■□□□□ 0.88
PDE1AP54750 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.53■□□□□ 0.88
PDE1AP54750 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PDE1AP54750 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms